Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9468296 chr6:28113730 A/G BTN3A2 chr6:26365387-26378548:+ -0.3 -6.29 7.26E-10 Box Plot
THCA rs9468297 chr6:28118874 G/T BTN3A2 chr6:26365387-26378548:+ -0.3 -6.3 6.95E-10 Box Plot
THCA rs9468298 chr6:28122345 A/G BTN3A2 chr6:26365387-26378548:+ -0.3 -6.31 6.3E-10 Box Plot
THCA rs9468300 chr6:28126840 C/T BTN3A2 chr6:26365387-26378548:+ -0.53 -9.41 2.1E-19 Box Plot
THCA rs9468300 chr6:28126840 C/T ZFP57 chr6:29640169-29648887:- 0.57 6.9 1.66E-11 Box Plot
THCA rs9468317 chr6:28198456 A/G BTN3A2 chr6:26365387-26378548:+ -0.39 -8.16 2.91E-15 Box Plot
THCA rs9468318 chr6:28209531 T/A BTN3A2 chr6:26365387-26378548:+ -0.4 -8.38 5.74E-16 Box Plot
THCA rs9468350 chr6:28319107 A/G ZFP57 chr6:29640169-29648887:- 0.38 6.2 1.23E-9 Box Plot
THCA rs9474982 chr6:54600465 T/C USP45 chr6:99880255-99969604:- 0.35 6.26 8.41E-10 Box Plot
THCA rs9474983 chr6:54601401 C/A USP45 chr6:99880255-99969604:- 0.35 6.26 8.41E-10 Box Plot
THCA rs947841 chr11:77592909 C/T INTS4L1 chr7:64601603-64694600:+ 0.62 10.17 4.09E-22 Box Plot
THCA rs9479036 chr6:151739595 T/A NEK5 chr13:52607747-52703214:- 0.49 6.22 1.07E-9 Box Plot
THCA rs949590 chr4:17062834 C/T SPPL2B chr19:2328614-2354804:+ -0.2 -5.88 7.83E-9 Box Plot
THCA rs950197 chr14:66736168 C/T ATP6V1D chr14:67761088-67826982:- 0.28 6.22 1.08E-9 Box Plot
THCA rs950656 chr7:54631086 A/G TSHZ1 chr18:72922710-73001905:+ 0.5 6.01 3.68E-9 Box Plot